Darrin M. York

Researcher Next ID · RN-019339

Researcher · Biochemistry, Genetics and Molecular Biology

New Brunswick, Japan

Not currently recruitingFunding unknown

Research interests

Biochemistry, Genetics and Molecular Biology

Physics and Astronomy

DNA and Nucleic Acid Chemistry

Protein Structure and Dynamics

RNA and protein synthesis mechanisms

Spectroscopy and Quantum Chemical Studies

Advanced Chemical Physics Studies

Recent Developments in Amber Biomolecular Simulations
Journal of Chemical Information and Modeling · 2025 · https://doi.org/10.1021/acs.jcim.5c01063
AmberTools
Journal of Chemical Information and Modeling · 2023 · https://doi.org/10.1021/acs.jcim.3c01153
DeePMD-kit v2: A software package for deep potential models
The Journal of Chemical Physics · 2023 · https://doi.org/10.1063/5.0155600
Amber 2021: Reference Manual
Open Repository and Bibliography (University of Luxembourg) · 2021
GPU-Accelerated Molecular Dynamics and Free Energy Methods in Amber18: Performance Enhancements and New Features
Journal of Chemical Information and Modeling · 2018 · https://doi.org/10.1021/acs.jcim.8b00462
Constant pH Replica Exchange Molecular Dynamics in Explicit Solvent Using Discrete Protonation States: Implementation, Testing, and Validation
Journal of Chemical Theory and Computation · 2014 · https://doi.org/10.1021/ct401042b
CHARMM: The biomolecular simulation program
Journal of Computational Chemistry · 2009 · https://doi.org/10.1002/jcc.21287
Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
The Journal of Chemical Physics · 1993 · https://doi.org/10.1063/1.464397

No projects listed.