Christian von Mering

Research interests

Publications

• The STRING database in 2025: protein networks with directionality of regulation

  Nucleic Acids Research · 2024 · 10.1093/nar/gkae1113

• The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest

  Nucleic Acids Research · 2022 · https://doi.org/10.1093/nar/gkac1000

• The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets

  Nucleic Acids Research · 2020 · https://doi.org/10.1093/nar/gkaa1074

• Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

  Nature · 2020 · https://doi.org/10.1038/s41586-020-1965-x

• eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses

  Nucleic Acids Research · 2018 · https://doi.org/10.1093/nar/gky1085

• STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets

  Nucleic Acids Research · 2018 · https://doi.org/10.1093/nar/gky1131

• Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper

  Molecular Biology and Evolution · 2017 · 10.1093/molbev/msx148

• The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible

  Nucleic Acids Research · 2016 · https://doi.org/10.1093/nar/gkw937

• eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

  Nucleic Acids Research · 2015 · 10.1093/nar/gkv1248

• STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data

  Nucleic Acids Research · 2015 · 10.1093/nar/gkv1277

• STRING v10: protein–protein interaction networks, integrated over the tree of life

  Nucleic Acids Research · 2014 · https://doi.org/10.1093/nar/gku1003

• eggNOG v4.0: nested orthology inference across 3686 organisms

  Nucleic Acids Research · 2013 · 10.1093/nar/gkt1253

• STRING v9.1: protein-protein interaction networks, with increased coverage and integration

  Nucleic Acids Research · 2012 · 10.1093/nar/gks1094

• eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges

  Nucleic Acids Research · 2011 · 10.1093/nar/gkr1060

• Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice

  The ISME Journal · 2011 · 10.1038/ismej.2011.192

• The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

  Nucleic Acids Research · 2010 · 10.1093/nar/gkq973

• Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

  Proceedings of the National Academy of Sciences · 2009 · 10.1073/pnas.0905240106

• STRING 8--a global view on proteins and their functional interactions in 630 organisms

  Nucleic Acids Research · 2008 · 10.1093/nar/gkn760

• STITCH: interaction networks of chemicals and proteins

  Nucleic Acids Research · 2007 · 10.1093/nar/gkm795

• Salmonella enterica Serovar Typhimurium Exploits Inflammation to Compete with the Intestinal Microbiota

  PLoS Biology · 2007 · 10.1371/journal.pbio.0050244

• Toward Automatic Reconstruction of a Highly Resolved Tree of Life

  Science · 2006 · 10.1126/science.1123061

• STRING 7--recent developments in the integration and prediction of protein interactions

  Nucleic Acids Research · 2006 · 10.1093/nar/gkl825

• Comparative Metagenomics of Microbial Communities

  Science · 2005 · 10.1126/science.1107851

• Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

  Socio-Environmental Systems Modeling · 2004 · 10.1038/nature03154

• STRING: known and predicted protein-protein associations, integrated and transferred across organisms

  Nucleic Acids Research · 2004 · 10.1093/nar/gki005

• STRING: a database of predicted functional associations between proteins

  Nucleic Acids Research · 2003 · 10.1093/nar/gkg034

• Comparative assessment of large-scale data sets of protein–protein interactions

  Nature · 2002 · 10.1038/nature750

• Immunity-Related Genes and Gene Families in Anopheles gambiae

  Science · 2002 · 10.1126/science.1077136

Current projects

No projects listed.