Hong Fang

Research interests

Publications

• An investigation of biomarkers derived from legacy microarray data for their utility in the RNA-seq era

  Genome biology · 2014 · https://doi.org/10.1186/s13059-014-0523-y

• The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

  Nature Biotechnology · 2014 · https://doi.org/10.1038/nbt.3001

• In silico drug repositioning – what we need to know

  Drug Discovery Today · 2012 · https://doi.org/10.1016/j.drudis.2012.08.005

• Toward interoperable bioscience data

  Nature Genetics · 2012 · https://doi.org/10.1038/ng.1054

• FDA-approved drug labeling for the study of drug-induced liver injury

  Drug Discovery Today · 2011 · https://doi.org/10.1016/j.drudis.2011.05.007

• A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data

  The Pharmacogenomics Journal · 2010 · https://doi.org/10.1038/tpj.2010.57

• The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

  Nature Biotechnology · 2010 · https://doi.org/10.1038/nbt.1665

• Mold2, Molecular Descriptors from 2D Structures for Chemoinformatics and Toxicoinformatics

  Journal of Chemical Information and Modeling · 2008 · https://doi.org/10.1021/ci800038f

• The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies

  BMC Bioinformatics · 2008 · https://doi.org/10.1186/1471-2105-9-s9-s10

• The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

  Nature Biotechnology · 2006 · https://doi.org/10.1038/nbt1239

• Study of 202 Natural, Synthetic, and Environmental Chemicals for Binding to the Androgen Receptor

  Chemical Research in Toxicology · 2003 · https://doi.org/10.1021/tx030011g

• Quantitative structure-activity relationship methods: Perspectives on drug discovery and toxicology

  Environmental Toxicology and Chemistry · 2003 · https://doi.org/10.1897/01-171

• Decision Forest: Combining the Predictions of Multiple Independent Decision Tree Models

  Journal of Chemical Information and Computer Sciences · 2003 · https://doi.org/10.1021/ci020058s

• ArrayTrack--supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research.

  Environmental Health Perspectives · 2003 · https://doi.org/10.1289/ehp.6497

• Structure−Activity Relationships for a Large Diverse Set of Natural, Synthetic, and Environmental Estrogens

  Chemical Research in Toxicology · 2001 · https://doi.org/10.1021/tx000208y

• QSAR Models Using a Large Diverse Set of Estrogens

  Journal of Chemical Information and Computer Sciences · 2000 · https://doi.org/10.1021/ci000066d

Current projects

No projects listed.