Kai Ye
Researcher Next ID · RN-022435
Researcher · Biochemistry, Genetics and Molecular Biology
Southwest University of Science and Technology
Mianyang, China
- Works count
- 473
- Citation count
- 101,860
- H-index
- 82
- i10-index
- 199
Research interests
Publications
NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads
Genome biology · 2024 · 10.1186/s13059-024-03252-4
NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads
Genome biology · 2024 · 10.1186/s13059-024-03252-4
High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios
Cell · 2022 · https://doi.org/10.1016/j.cell.2022.08.004
Haplotype-resolved diverse human genomes and integrated analysis of structural variation
Science · 2021 · https://doi.org/10.1126/science.abf7117
Human-specific tandem repeat expansion and differential gene expression during primate evolution
Proceedings of the National Academy of Sciences · 2019 · https://doi.org/10.1073/pnas.1912175116
Multi-platform discovery of haplotype-resolved structural variation in human genomes
Nature Communications · 2019 · https://doi.org/10.1038/s41467-018-08148-z
The opium poppy genome and morphinan production
Science · 2018 · 10.1126/science.aat4096
The opium poppy genome and morphinan production
Science · 2018 · 10.1126/science.aat4096
Proteogenomic integration reveals therapeutic targets in breast cancer xenografts
Nature Communications · 2017 · https://doi.org/10.1038/ncomms14864
Computational pan-genomics: status, promises and challenges
Briefings in Bioinformatics · 2016 · https://doi.org/10.1093/bib/bbw089
Patterns and functional implications of rare germline variants across 12 cancer types
Nature Communications · 2015 · 10.1038/ncomms10086
An integrated map of structural variation in 2,504 human genomes
Nature · 2015 · https://doi.org/10.1038/nature15394
A Tandem Duplicate of Anti-Müllerian Hormone with a Missense SNP on the Y Chromosome Is Essential for Male Sex Determination in Nile Tilapia, Oreochromis niloticus
PLoS Genetics · 2015 · 10.1371/journal.pgen.1005678
Genome-wide patterns and properties of de novo mutations in humans
Nature Genetics · 2015 · 10.1038/ng.3292
Matrix Stiffness and Nanoscale Spatial Organization of Cell-Adhesive Ligands Direct Stem Cell Fate
Nano Letters · 2015 · 10.1021/acs.nanolett.5b01619
Patterns and functional implications of rare germline variants across 12 cancer types
Nature Communications · 2015 · 10.1038/ncomms10086
A Tandem Duplicate of Anti-Müllerian Hormone with a Missense SNP on the Y Chromosome Is Essential for Male Sex Determination in Nile Tilapia, Oreochromis niloticus
PLoS Genetics · 2015 · 10.1371/journal.pgen.1005678
Genome-wide patterns and properties of de novo mutations in humans
Nature Genetics · 2015 · 10.1038/ng.3292
Matrix Stiffness and Nanoscale Spatial Organization of Cell-Adhesive Ligands Direct Stem Cell Fate
Nano Letters · 2015 · 10.1021/acs.nanolett.5b01619
Comprehensive molecular profiling of lung adenocarcinoma
Nature · 2014 · https://doi.org/10.1038/nature13385
Whole-genome sequence variation, population structure and demographic history of the Dutch population
Nature Genetics · 2014 · 10.1038/ng.3021
Mutational landscape and significance across 12 major cancer types
Nature · 2013 · https://doi.org/10.1038/nature12634
Integrated genomic characterization of endometrial carcinoma
Carolina Digital Repository (University of North Carolina at Chapel Hill) · 2013 · https://doi.org/10.1038/nature12113
The Genome of the Netherlands: design, and project goals
European Journal of Human Genetics · 2013 · https://doi.org/10.1038/ejhg.2013.118
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data
Bioinformatics · 2013 · 10.1093/bioinformatics/btt755
A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes
Science · 2012 · 10.1126/science.1215040
Mapping copy number variation by population-scale genome sequencing
Nature · 2011 · 10.1038/nature09708
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
Bioinformatics · 2009 · https://doi.org/10.1093/bioinformatics/btp394
A comprehensive catalogue of somatic mutations from a human cancer genome
Nature · 2009 · https://doi.org/10.1038/nature08658
Current projects
No projects listed.