Matej Orešič

Research interests

Publications

• An unbiased ranking of murine dietary models based on their proximity to human metabolic dysfunction-associated steatotic liver disease (MASLD)

  Nature Metabolism · 2024 · https://doi.org/10.1038/s42255-024-01043-6

• Integrative analysis of multimodal mass spectrometry data in MZmine 3

  Nature Biotechnology · 2023 · https://doi.org/10.1038/s41587-023-01690-2

• Traumatic brain injury: progress and challenges in prevention, clinical care, and research

  The Lancet Neurology · 2022 · https://doi.org/10.1016/s1474-4422(22)00309-x

• Serum metabolome associated with severity of acute traumatic brain injury

  Nature Communications · 2022 · https://doi.org/10.1038/s41467-022-30227-5

• Metabolomics and lipidomics in NAFLD: biomarkers and non-invasive diagnostic tests

  Nature Reviews Gastroenterology & Hepatology · 2021 · https://doi.org/10.1038/s41575-021-00502-9

• Diagnostic accuracy of elastography and magnetic resonance imaging in patients with NAFLD: A systematic review and meta-analysis

  Journal of Hepatology · 2021 · https://doi.org/10.1016/j.jhep.2021.04.044

• Transcriptomic profiling across the nonalcoholic fatty liver disease spectrum reveals gene signatures for steatohepatitis and fibrosis

  Science Translational Medicine · 2020 · https://doi.org/10.1126/scitranslmed.aba4448

• The Consortium of Metabolomics Studies (COMETS): Metabolomics in 47 Prospective Cohort Studies

  American Journal of Epidemiology · 2019 · https://doi.org/10.1093/aje/kwz028

• Saturated Fat Is More Metabolically Harmful for the Human Liver Than Unsaturated Fat or Simple Sugars

  Diabetes Care · 2018 · https://doi.org/10.2337/dc18-0071

• Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950–Metabolites in Frozen Human Plasma

  Journal of Lipid Research · 2017 · https://doi.org/10.1194/jlr.m079012

• Metabolomics enables precision medicine: “A White Paper, Community Perspective”

  Metabolomics · 2016 · https://doi.org/10.1007/s11306-016-1094-6

• Human gut microbes impact host serum metabolome and insulin sensitivity

  Nature · 2016 · https://doi.org/10.1038/nature18646

• The Dynamics of the Human Infant Gut Microbiome in Development and in Progression toward Type 1 Diabetes

  Cell Host & Microbe · 2015 · https://doi.org/10.1016/j.chom.2015.01.001

• Effects of an isocaloric healthy N ordic diet on insulin sensitivity, lipid profile and inflammation markers in metabolic syndrome – a randomized study ( SYSDIET )

  Journal of Internal Medicine · 2013 · https://doi.org/10.1111/joim.12044

• Gut Microbiota Regulates Bile Acid Metabolism by Reducing the Levels of Tauro-beta-muricholic Acid, a Naturally Occurring FXR Antagonist

  Cell Metabolism · 2013 · https://doi.org/10.1016/j.cmet.2013.01.003

• Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data

  PeerJ · 2013 · https://doi.org/10.7717/peerj.32

• Human Tear Fluid Lipidome: From Composition to Function

  PLoS ONE · 2011 · https://doi.org/10.1371/journal.pone.0019553

• MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

  BMC Bioinformatics · 2010 · https://doi.org/10.1186/1471-2105-11-395

• Mitochondrial myopathy induces a starvation-like response

  Human Molecular Genetics · 2010 · https://doi.org/10.1093/hmg/ddq310

• Link between plasma ceramides, inflammation and insulin resistance: association with serum IL-6 concentration in patients with coronary heart disease

  Diabetologia · 2009 · https://doi.org/10.1007/s00125-009-1482-9

• Dysregulation of lipid and amino acid metabolism precedes islet autoimmunity in children who later progress to type 1 diabetes

  The Journal of Experimental Medicine · 2008 · https://doi.org/10.1084/jem.20081800

Current projects

No projects listed.