Akhilesh Pandey

Research interests

Publications

• Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy

  Cell · 2020 · 10.1016/j.cell.2020.10.036

• Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

  Cell · 2019 · https://doi.org/10.1016/j.cell.2019.03.030

• Homer1a drives homeostatic scaling-down of excitatory synapses during sleep

  Science · 2017 · 10.1126/science.aai8355

• Correction: Corrigendum: A dual specificity kinase, DYRK1A, as a potential therapeutic target for head and neck squamous cell carcinoma

  Scientific Reports · 2017 · 10.1038/srep46864

• Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer

  Cell · 2016 · https://doi.org/10.1016/j.cell.2016.05.069

• C9orf72 nucleotide repeat structures initiate molecular cascades of disease

  Nature · 2014 · 10.1038/nature13124

• A draft map of the human proteome

  Nature · 2014 · https://doi.org/10.1038/nature13302

• Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation

  PLoS Biology · 2012 · https://doi.org/10.1371/journal.pbio.1001450

• Pyruvate Kinase M2 Is a PHD3-Stimulated Coactivator for Hypoxia-Inducible Factor 1

  Cell · 2011 · https://doi.org/10.1016/j.cell.2011.03.054

• The BioPAX community standard for pathway data sharing

  Nature Biotechnology · 2010 · 10.1038/nbt.1666

• NetPath: a public resource of curated signal transduction pathways

  Genome biology · 2010 · 10.1186/gb-2010-11-1-r3

• Human Protein Reference Database--2009 update

  Nucleic Acids Research · 2008 · 10.1093/nar/gkn892

• Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry

  Proceedings of the National Academy of Sciences · 2007 · 10.1073/pnas.0611217104

• GCN5 acetyltransferase complex controls glucose metabolism through transcriptional repression of PGC-1α

  Cell Metabolism · 2006 · 10.1016/j.cmet.2006.04.013

• Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets

  Nature Genetics · 2006 · 10.1038/ng1747

• Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly‐available database

  PROTEOMICS · 2005 · 10.1002/pmic.200500358

• Biomarker Discovery from Pancreatic Cancer Secretome Using a Differential Proteomic Approach

  Molecular & Cellular Proteomics · 2005 · 10.1074/mcp.m500178-mcp200

• The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data

  Nature Biotechnology · 2004 · 10.1038/nbt926

• Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression

  Proceedings of the National Academy of Sciences · 2004 · 10.1073/pnas.0401994101

• Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans

  Genome Research · 2003 · 10.1101/gr.1680803

• Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics

  Molecular & Cellular Proteomics · 2002 · 10.1074/mcp.m200025-mcp200

• Analysis of protein phosphorylation using mass spectrometry: deciphering the phosphoproteome

  Trends in biotechnology · 2002 · 10.1016/s0167-7799(02)01944-3

• Analysis of Proteins and Proteomes by Mass Spectrometry

  Annual Review of Biochemistry · 2001 · 10.1146/annurev.biochem.70.1.437

• Cloning of a receptor subunit required for signaling by thymic stromal lymphopoietin

  Nature Immunology · 2000 · 10.1038/76923

• Proteomics to study genes and genomes

  Nature · 2000 · 10.1038/35015709

Current projects

No projects listed.