Andrey D. Prjibelski
Researcher Next ID · RN-023575
Researcher · Biochemistry, Genetics and Molecular Biology
Helsinki, Finland
- Works count
- 70
- Citation count
- 37,601
- H-index
- 22
- i10-index
- 33
Research interests
Publications
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
Nature Methods · 2024 · 10.1038/s41592-024-02298-3
Accurate isoform discovery with IsoQuant using long reads
Nature Biotechnology · 2023 · 10.1038/s41587-022-01565-y
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue
Nature Biotechnology · 2022 · 10.1038/s41587-022-01231-3
A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain
Nature Communications · 2021 · 10.1038/s41467-020-20343-5
Using SPAdes De Novo Assembler
Current Protocols in Bioinformatics · 2020 · https://doi.org/10.1002/cpbi.102
rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data
GigaScience · 2019 · https://doi.org/10.1093/gigascience/giz100
Versatile genome assembly evaluation with QUAST-LG
Bioinformatics · 2018 · https://doi.org/10.1093/bioinformatics/bty266
rnaQUAST: a quality assessment tool for de novo transcriptome assemblies
Bioinformatics · 2016 · 10.1093/bioinformatics/btw218
Icarus: visualizer for de novo assembly evaluation
Bioinformatics · 2016 · 10.1093/bioinformatics/btw379
ExSPAnder: a universal repeat resolver for DNA fragment assembly
Bioinformatics · 2014 · 10.1093/bioinformatics/btu266
Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products
Journal of Computational Biology · 2013 · https://doi.org/10.1089/cmb.2013.0084
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Journal of Computational Biology · 2012 · https://doi.org/10.1089/cmb.2012.0021
Current projects
No projects listed.