M Snyder

Research interests

Publications

• Biomarkers of aging for the identification and evaluation of longevity interventions

  Cell · 2023 · https://doi.org/10.1016/j.cell.2023.08.003

• Exerkines in health, resilience and disease

  Nature Reviews Endocrinology · 2022 · https://doi.org/10.1038/s41574-022-00641-2

• Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices

  Nature Methods · 2021 · https://doi.org/10.1038/s41592-021-01197-1

• Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy

  Cell · 2020 · 10.1016/j.cell.2020.10.036

• The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

  Cell · 2020 · https://doi.org/10.1016/j.cell.2020.03.053

• The human body at cellular resolution: the NIH Human Biomolecular Atlas Program

  Nature · 2019 · https://doi.org/10.1038/s41586-019-1629-x

• The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight

  Science · 2019 · 10.1126/science.aau8650

• Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

  Cell · 2019 · 10.1016/j.cell.2019.03.030

• Integrative omics for health and disease

  Nature Reviews Genetics · 2018 · 10.1038/nrg.2018.4

• How many human proteoforms are there?

  Nature Chemical Biology · 2018 · 10.1038/nchembio.2576

• Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution

  Nature Genetics · 2016 · 10.1038/ng.3646

• Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer

  Cell · 2016 · 10.1016/j.cell.2016.05.069

• Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer

  Cell · 2016 · 10.1016/j.cell.2016.05.069

• A proposal for validation of antibodies

  Nature Methods · 2016 · 10.1038/nmeth.3995

• High-Throughput Sequencing Technologies

  Molecular Cell · 2015 · 10.1016/j.molcel.2015.05.004

• Single-cell chromatin accessibility reveals principles of regulatory variation

  Nature · 2015 · 10.1038/nature14590

• Defining functional DNA elements in the human genome

  Proceedings of the National Academy of Sciences · 2014 · 10.1073/pnas.1318948111

• Topologically associating domains are stable units of replication-timing regulation

  Nature · 2014 · 10.1038/nature13986

• Extensive Promoter-Centered Chromatin Interactions Provide a Topological Basis for Transcription Regulation

  Cell · 2012 · 10.1016/j.cell.2011.12.014

• Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes

  Cell · 2012 · 10.1016/j.cell.2012.02.009

• Annotation of functional variation in personal genomes using RegulomeDB

  Genome Research · 2012 · 10.1101/gr.137323.112

• Architecture of the human regulatory network derived from ENCODE data

  Nature · 2012 · 10.1038/nature11245

• ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

  Genome Research · 2012 · 10.1101/gr.136184.111

• An integrated encyclopedia of DNA elements in the human genome

  Nature · 2012 · https://doi.org/10.1038/nature11247

• CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

  Genome Research · 2011 · 10.1101/gr.114876.110

• Mapping copy number variation by population-scale genome sequencing

  Nature · 2011 · 10.1038/nature09708

• Unlocking the secrets of the genome

  Nature · 2009 · 10.1038/459927a

• RNA-Seq: a revolutionary tool for transcriptomics

  Nature Reviews Genetics · 2008 · https://doi.org/10.1038/nrg2484

• High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

  Science · 2008 · 10.1126/science.1158684

• The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

  Science · 2008 · 10.1126/science.1158441

• Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

  Nature Methods · 2007 · 10.1038/nmeth1068

• Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

  Nature · 2007 · https://doi.org/10.1038/nature05874

• Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome

  Science · 2007 · 10.1126/science.1149504

• Genomic analysis of regulatory network dynamics reveals large topological changes

  Nature · 2004 · 10.1038/nature02782

• A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

  Science · 2003 · 10.1126/science.1087361

• Functional profiling of the Saccharomyces cerevisiae genome

  Nature · 2002 · https://doi.org/10.1038/nature00935

• Global Analysis of Protein Activities Using Proteome Chips

  Science · 2001 · 10.1126/science.1062191

• Functional Characterization of the S. cerevisiae Genome by Gene Deletion and Parallel Analysis

  Science · 1999 · https://doi.org/10.1126/science.285.5429.901

Current projects

No projects listed.