Intawat Nookaew

Research interests

Publications

• MEMOTE for standardized genome-scale metabolic model testing

  Nature Biotechnology · 2020 · https://doi.org/10.1038/s41587-020-0446-y

• Decoding the epitranscriptional landscape from native RNA sequences

  Nucleic Acids Research · 2020 · 10.1093/nar/gkaa620

• Stimulation of Piezo1 by mechanical signals promotes bone anabolism

  eLife · 2019 · 10.7554/elife.49631

• Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D

  Nucleic Acids Research · 2018 · 10.1093/nar/gky014

• Abiotic Stresses Shift Belowground Populus -Associated Bacteria Toward a Core Stress Microbiome

  mSystems · 2018 · 10.1128/msystems.00070-17

• PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin

  Frontiers in Microbiology · 2018 · 10.3389/fmicb.2018.01757

• Voluntary Running Suppresses Tumor Growth through Epinephrine- and IL-6-Dependent NK Cell Mobilization and Redistribution

  Cell Metabolism · 2016 · https://doi.org/10.1016/j.cmet.2016.01.011

• Insights from 20 years of bacterial genome sequencing

  Functional & Integrative Genomics · 2015 · https://doi.org/10.1007/s10142-015-0433-4

• Site-specific programming of the host epithelial transcriptome by the gut microbiota

  Genome biology · 2015 · 10.1186/s13059-015-0614-4

• Chromosome 3p loss of heterozygosity is associated with a unique metabolic network in clear cell renal carcinoma

  Proceedings of the National Academy of Sciences · 2014 · 10.1073/pnas.1319196111

• Understanding the interactions between bacteria in the human gut through metabolic modeling

  Scientific Reports · 2013 · 10.1038/srep02532

• Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods

  Nucleic Acids Research · 2013 · https://doi.org/10.1093/nar/gkt111

• Gut metagenome in European women with normal, impaired and diabetic glucose control

  Nature · 2013 · 10.1038/nature12198

• The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum

  PLoS Computational Biology · 2013 · 10.1371/journal.pcbi.1002980

• Rapid Quantification of Yeast Lipid using Microwave-Assisted Total Lipid Extraction and HPLC-CAD

  Analytical Chemistry · 2013 · 10.1021/ac3032405

• A community-driven global reconstruction of human metabolism

  Nature Biotechnology · 2013 · https://doi.org/10.1038/nbt.2488

• Integration of clinical data with a genome‐scale metabolic model of the human adipocyte

  Molecular Systems Biology · 2013 · 10.1038/msb.2013.5

• Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling

  BMC Systems Biology · 2013 · 10.1186/1752-0509-7-36

• Adipose Tissue Resting Energy Expenditure and Expression of Genes Involved in Mitochondrial Function Are Higher in Women than in Men

  The Journal of Clinical Endocrinology & Metabolism · 2012 · 10.1210/jc.2012-2764

• A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

  Nucleic Acids Research · 2012 · 10.1093/nar/gks804

• Symptomatic atherosclerosis is associated with an altered gut metagenome

  Nature Communications · 2012 · 10.1038/ncomms2266

• Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT

  PLoS Computational Biology · 2012 · 10.1371/journal.pcbi.1002518

• Analysis of gut microbial regulation of host gene expression along the length of the gut and regulation of gut microbial ecology through MyD88

  Gut · 2011 · 10.1136/gutjnl-2011-301104

• A Closer Look at Bacteroides: Phylogenetic Relationship and Genomic Implications of a Life in the Human Gut

  Microbial Ecology · 2011 · 10.1007/s00248-010-9796-1

• The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism

  BMC Systems Biology · 2008 · 10.1186/1752-0509-2-71

Current projects

No projects listed.