Linn Fagerberg

Research interests

Publications

• Systematic transcriptional analysis of human cell lines for gene expression landscape and tumor representation

  Nature Communications · 2023 · 10.1038/s41467-023-41132-w

• Dynamics of the normal gut microbiota: A longitudinal one-year population study in Sweden

  Cell Host & Microbe · 2022 · 10.1016/j.chom.2022.03.002

• Next generation plasma proteome profiling to monitor health and disease

  Nature Communications · 2021 · 10.1038/s41467-021-22767-z

• A single–cell type transcriptomics map of human tissues

  Science Advances · 2021 · https://doi.org/10.1126/sciadv.abh2169

• Integration of molecular profiles in a longitudinal wellness profiling cohort

  Nature Communications · 2020 · 10.1038/s41467-020-18148-7

• An atlas of the protein-coding genes in the human, pig, and mouse brain

  Science · 2020 · https://doi.org/10.1126/science.aay5947

• A genome-wide transcriptomic analysis of protein-coding genes in human blood cells

  Science · 2019 · https://doi.org/10.1126/science.aax9198

• The human secretome

  Science Signaling · 2019 · 10.1126/scisignal.aaz0274

• A pathology atlas of the human cancer transcriptome

  Science · 2017 · https://doi.org/10.1126/science.aan2507

• A subcellular map of the human proteome

  Science · 2017 · https://doi.org/10.1126/science.aal3321

• Profiling cancer testis antigens in non–small-cell lung cancer

  JCI Insight · 2016 · 10.1172/jci.insight.86837

• Complementing tissue characterization by integrating transcriptome profiling from the Human Protein Atlas and from the FANTOM5 consortium

  Nucleic Acids Research · 2015 · 10.1093/nar/gkv608

• Tissue-based map of the human proteome

  Science · 2015 · https://doi.org/10.1126/science.1260419

• The human testis-specific proteome defined by transcriptomics and antibody-based profiling

  Molecular Human Reproduction · 2014 · 10.1093/molehr/gau018

• Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics

  Molecular & Cellular Proteomics · 2013 · https://doi.org/10.1074/mcp.m113.035600

• A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

  Nucleic Acids Research · 2012 · 10.1093/nar/gks804

• Prediction of the human membrane proteome

  PROTEOMICS · 2010 · 10.1002/pmic.200900258

• Defining the transcriptome and proteome in three functionally different human cell lines

  Molecular Systems Biology · 2010 · 10.1038/msb.2010.106

• Towards a knowledge-based Human Protein Atlas

  Nature Biotechnology · 2010 · https://doi.org/10.1038/nbt1210-1248

• A global view of protein expression in human cells, tissues, and organs

  Molecular Systems Biology · 2009 · 10.1038/msb.2009.93

• A Genecentric Human Protein Atlas for Expression Profiles Based on Antibodies

  Molecular & Cellular Proteomics · 2008 · 10.1074/mcp.r800013-mcp200

• A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics

  Molecular & Cellular Proteomics · 2005 · 10.1074/mcp.m500279-mcp200

Current projects

No projects listed.