Tao Liu

Research interests

Publications

• Viral infection and transmission in a large, well-traced outbreak caused by the SARS-CoV-2 Delta variant

  medRxiv · 2021 · https://doi.org/10.1101/2021.07.07.21260122

• Proteogenomic and metabolomic characterization of human glioblastoma

  Cancer Cell · 2021 · https://doi.org/10.1016/j.ccell.2021.01.006

• Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China

  Cell · 2020 · https://doi.org/10.1016/j.cell.2020.04.023

• Proteogenomic Characterization of Endometrial Carcinoma

  Cell · 2020 · https://doi.org/10.1016/j.cell.2020.01.026

• Resource recovery and circular economy from organic solid waste using aerobic and anaerobic digestion technologies

  Bioresource Technology · 2020 · https://doi.org/10.1016/j.biortech.2020.122778

• Integrated Proteogenomic Characterization across Major Histological Types of Pediatric Brain Cancer

  Cell · 2020 · https://doi.org/10.1016/j.cell.2020.10.044

• RETRACTED: Changes in global trends in food waste composting: Research challenges and opportunities

  Bioresource Technology · 2019 · https://doi.org/10.1016/j.biortech.2019.122555

• The Critical Role of RNA m6A Methylation in Cancer

  Cancer Research · 2019 · https://doi.org/10.1158/0008-5472.can-18-2965

• Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

  Cell · 2019 · https://doi.org/10.1016/j.cell.2019.03.030

• Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry

  Nature Protocols · 2018 · https://doi.org/10.1038/s41596-018-0006-9

• Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer

  Cell · 2016 · https://doi.org/10.1016/j.cell.2016.05.069

• Advances in targeted proteomics and applications to biomedical research

  PROTEOMICS · 2016 · https://doi.org/10.1002/pmic.201500449

• Signaling pathway of MAPK/ERK in cell proliferation, differentiation, migration, senescence and apoptosis

  Journal of Receptors and Signal Transduction · 2015 · https://doi.org/10.3109/10799893.2015.1030412

• Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry–Based Assays

  Clinical Chemistry · 2015 · https://doi.org/10.1373/clinchem.2015.250563

• Ischemia in Tumors Induces Early and Sustained Phosphorylation Changes in Stress Kinase Pathways but Does Not Affect Global Protein Levels

  Molecular & Cellular Proteomics · 2014 · https://doi.org/10.1074/mcp.m113.036392

• ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

  Genome Research · 2012 · https://doi.org/10.1101/gr.136184.111

• Advancing the sensitivity of selected reaction monitoring‐based targeted quantitative proteomics

  PROTEOMICS · 2012 · https://doi.org/10.1002/pmic.201100436

• Identifying ChIP-seq enrichment using MACS

  Nature Protocols · 2012 · https://doi.org/10.1038/nprot.2012.101

• EZH2 Oncogenic Activity in Castration-Resistant Prostate Cancer Cells Is Polycomb-Independent

  Science · 2012 · https://doi.org/10.1126/science.1227604

• Reversed‐phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells

  PROTEOMICS · 2011 · https://doi.org/10.1002/pmic.201000722

• Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

  Science · 2010 · https://doi.org/10.1126/science.1196914

• The Critical Role of the Class III Histone Deacetylase SIRT1 in Cancer

  Cancer Research · 2009 · https://doi.org/10.1158/0008-5472.can-08-3365

• Model-based Analysis of ChIP-Seq (MACS)

  Genome biology · 2008 · https://doi.org/10.1186/gb-2008-9-9-r137

• Advances and Challenges in Liquid Chromatography-Mass Spectrometry-based Proteomics Profiling for Clinical Applications

  Molecular & Cellular Proteomics · 2006 · https://doi.org/10.1074/mcp.m600162-mcp200

• Human Plasma N -Glycoproteome Analysis by Immunoaffinity Subtraction, Hydrazide Chemistry, and Mass Spectrometry

  Journal of Proteome Research · 2005 · https://doi.org/10.1021/pr0502065

• Utilizing Human Blood Plasma for Proteomic Biomarker Discovery

  Journal of Proteome Research · 2005 · https://doi.org/10.1021/pr0500657

• Probability-Based Evaluation of Peptide and Protein Identifications from Tandem Mass Spectrometry and SEQUEST Analysis: The Human Proteome

  Journal of Proteome Research · 2004 · https://doi.org/10.1021/pr0498638

• Large-scale delineation of secreted protein biomarkers overexpressed in cancer tissue and serum

  Proceedings of the National Academy of Sciences · 2003 · https://doi.org/10.1073/pnas.0530278100

Current projects

No projects listed.