Ernesto Nakayasu

Research interests

Publications

• Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

  Nature Cell Biology · 2023 · https://doi.org/10.1038/s41556-023-01194-w

• Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

  Nature Cell Biology · 2023 · https://doi.org/10.1038/s41556-023-01194-w

• Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation

  Nature Protocols · 2021 · https://doi.org/10.1038/s41596-021-00566-6

• The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes

  Nature Genetics · 2019 · 10.1038/s41588-019-0524-6

• Listeria monocytogenes virulence factors, including listeriolysin O, are secreted in biologically active extracellular vesicles

  Journal of Biological Chemistry · 2018 · https://doi.org/10.1074/jbc.ra118.006472

• MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses

  mSystems · 2016 · https://doi.org/10.1128/msystems.00043-16

• Ubiquitination independent of E1 and E2 enzymes by bacterial effectors

  Nature · 2016 · 10.1038/nature17657

• Extracellular Vesicles from Trypanosoma brucei Mediate Virulence Factor Transfer and Cause Host Anemia

  Cell · 2016 · 10.1016/j.cell.2015.11.051

• Compositional and immunobiological analyses of extracellular vesicles released byCandida albicans

  Cellular Microbiology · 2014 · 10.1111/cmi.12374

• Top-down proteomics reveals a unique protein S-thiolation switch in Salmonella Typhimurium in response to infection-like conditions

  Proceedings of the National Academy of Sciences · 2013 · https://doi.org/10.1073/pnas.1221210110

• Activated ClpP kills persisters and eradicates a chronic biofilm infection

  Nature · 2013 · https://doi.org/10.1038/nature12790

• Vesicle and Vesicle-Free Extracellular Proteome of Paracoccidioides brasiliensis: Comparative Analysis with Other Pathogenic Fungi

  Journal of Proteome Research · 2012 · 10.1021/pr200872s

• Model‐driven multi‐omic data analysis elucidates metabolic immunomodulators of macrophage activation

  Molecular Systems Biology · 2012 · 10.1038/msb.2012.21

• Exosomes from Plasmodium yoelii-Infected Reticulocytes Protect Mice from Lethal Infections

  PLoS ONE · 2011 · 10.1371/journal.pone.0026588

• Characterization of Yeast Extracellular Vesicles: Evidence for the Participation of Different Pathways of Cellular Traffic in Vesicle Biogenesis

  PLoS ONE · 2010 · 10.1371/journal.pone.0011113

• Vesicular transport inHistoplasma capsulatum: an effective mechanism for trans-cell wall transfer of proteins and lipids in ascomycetes

  Cellular Microbiology · 2008 · 10.1111/j.1462-5822.2008.01160.x

• Extracellular Vesicles Produced by Cryptococcus neoformans Contain Protein Components Associated with Virulence

  Eukaryotic Cell · 2007 · 10.1128/ec.00370-07

Current projects

No projects listed.