Josie Eder

Research interests

Publications

• Integrated proteogenomic and metabolomic profiling of acute myeloid leukemias to identify molecular subtypes and associated therapy targets

  Nature Cancer · 2026 · 10.1038/s43018-026-01175-6

• Nitrogen limitation causes a seismic shift in redox state and phosphorylation of proteins implicated in carbon flux and lipidome remodeling in Rhodotorula toruloides

  Biotechnology for Biofuels and Bioproducts · 2025 · 10.1186/s13068-025-02657-y

• Root exudate lipids: Uncovering chemodiversity and carbon stability potential

  Soil Biology and Biochemistry · 2025 · 10.1016/j.soilbio.2025.109799

• Nitrogen limitation causes a seismic shift in redox state and phosphorylation of proteins implicated in carbon flux and lipidome remodeling in Rhodotorula toruloides

  Biotechnology for Biofuels and Bioproducts · 2025 · 10.1186/s13068-025-02657-y

• Integrated lipidomic and proteomic profiling reveals metabolic network disruption by SARS-CoV-2 variants

  Journal of Lipid Research · 2025 · 10.1016/j.jlr.2025.100860

• Proinflammatory Stress Activates Neutral Sphingomyelinase 2–Based Generation of a Ceramide-Enriched β-Cell EV Subpopulation

  Diabetes · 2025 · 10.2337/db24-0341

• Multi-scale signaling and tumor evolution in high-grade gliomas

  Cancer Cell · 2024 · 10.1016/j.ccell.2024.06.004

• Associations between SARS-CoV-2 Infection or COVID-19 Vaccination and Human Milk Composition: A Multi-Omics Approach

  Journal of Nutrition · 2024 · 10.1016/j.tjnut.2024.09.032

• Unveiling lipid chemodiversity in root exudates: A comprehensive characterization of the exudate metabo-lipidome in a perennial grass

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · 10.1101/2024.03.22.586263

• Multiplatform metabolomic interlaboratory study of a whole human stool candidate reference material from omnivore and vegan donors

  Metabolomics · 2024 · 10.1007/s11306-024-02185-0

• PeakQC: A Software Tool for Omics-Agnostic Automated Quality Control of Mass Spectrometry Data

  Journal of the American Society for Mass Spectrometry · 2024 · 10.1021/jasms.4c00146

• Reviews and syntheses: Opportunities for robust use of peak intensities from high-resolution mass spectrometry in organic matter studies

  Biogeosciences · 2024 · 10.5194/bg-21-4665-2024

• A deep learning‐guided automated workflow in LipidOz for detailed characterization of fungal fatty acid unsaturation by ozonolysis

  Journal of Mass Spectrometry · 2024 · 10.1002/jms.5078

• LipidOz enables automated elucidation of lipid carbon–carbon double bond positions from ozone-induced dissociation mass spectrometry data

  Communications Chemistry · 2023 · 10.1038/s42004-023-00867-9

• Changes in environmental and engineered conditions alter the plasma membrane lipidome of fractured shale bacteria

  Microbiology Spectrum · 2023 · 10.1128/spectrum.02334-23

• Are Phosphatidic Acids Ubiquitous in Mammalian Tissues or Overemphasized in Mass Spectrometry Imaging Applications?

  Analysis & Sensing · 2023 · 10.1002/anse.202200112

• Are Phosphatidic Acids Ubiquitous in Mammalian Tissues or Overemphasized in Mass Spectrometry Imaging Applications?

  Analysis & Sensing · 2023 · 10.1002/anse.202200112

• Applying Multimodal Mass Spectrometry to Image Tumors Undergoing Ferroptosis Following In Vivo Treatment with a Ferroptosis Inducer

  Journal of the American Society for Mass Spectrometry · 2023 · 10.1021/jasms.3c00193

• Reviews and syntheses: Use and misuse of peak intensities from high resolution mass spectrometry in organic matter studies: opportunities for robust usage

  Journal · 2022 · 10.5194/egusphere-2022-1105

Current projects

No projects listed.