Matthew Gaffrey
Researcher Next ID · RN-031097
Researcher · Earth and Planetary Sciences
Pacific Northwest National Laboratory
Richland, United States
- Works count
- 10,039
- Citation count
- 2,298
- H-index
- 27
- i10-index
- 43
Research interests
Publications
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629530/3805570
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625278/3807720
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625187/3807704
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625253/3807713
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625581/3807740
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2624799/3809062
Data for EMSL Project 60297 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2627055/3806714
Data for EMSL Project 51646 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2627743/3806930
Data for EMSL Project 50815 from September 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-09.2604835/3816872
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629377/3807173
Data for EMSL Project 50815 from September 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-09.2609378/3815323
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629512/3805553
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629702/3805727
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629548/3805587
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629381/3807177
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629656/3805687
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629740/3805753
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629364/3807163
Data for EMSL Project 50815 from September 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-09.2604938/3816877
Data for EMSL Project 50815 from September 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-09.2610877/3814047
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629574/3805612
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629514/3805555
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2623525/3808522
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629444/3807229
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2617461/3811590
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629483/3805527
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629368/3807166
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2617434/3811588
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2621525/3810870
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2621381/3810862
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629488/3805532
Data for EMSL Project 50815 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2629297/3807139
Human Coronavirus 229E Infection Alters Histone Proteoforms
Journal of Proteome Research · 2026 · 10.1021/acs.jproteome.5c01015
Ampk alpha2 T172 activation dictates exercise performance and energy transduction in skeletal muscle
Science Advances · 2026 · 10.1126/sciadv.aeb3338
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625578/3807737
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2624693/3809056
Data for EMSL Project 51874 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2622694/3809574
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625223/3807710
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625361/3807728
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625355/3807727
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625404/3807730
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2624872/3809067
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625195/3807706
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2624764/3809060
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625831/3807744
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625180/3807702
Data for EMSL Project 51874 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2622425/3809570
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625103/3807697
Data for EMSL Project 51874 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2626394/3807924
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625254/3807714
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625287/3807721
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625577/3807736
Data for EMSL Project 51846 from October 2022
DOE Pacific Northwest National Laboratory (PNNL) Repository · 2026 · 10.25582/data.2022-10.2625264/3807716
Integrative Multi-PTM Proteomics Reveals Dynamic Global, Redox, Phosphorylation, and Acetylation Regulation in Cytokine-Treated Pancreatic Beta Cells
Molecular & Cellular Proteomics · 2025 · 10.1016/j.mcpro.2025.101056
A Mass Spectrometry-Based Proteomics Workflow for Concurrent Profiling of Protein Thiol Oxidation and Phosphorylation
Methods in molecular biology · 2025 · 10.1007/978-1-0716-4574-1_17
Signatures of cysteine oxidation on muscle structural and contractile proteins are associated with physical performance and muscle function in older adults: Study of Muscle, Mobility and Aging (SOMMA)
Aging Cell · 2024 · 10.1111/acel.14094
Redox regulation of m6A methyltransferase METTL3 in β-cells controls the innate immune response in type 1 diabetes
Nature Cell Biology · 2024 · 10.1038/s41556-024-01368-0
Integrative Multi-PTM Proteomics Reveals Dynamic Global, Redox, Phosphorylation, and Acetylation Regulation in Cytokine-Treated Pancreatic Beta Cells
Molecular & Cellular Proteomics · 2024 · 10.1016/j.mcpro.2024.100881
In-Depth Proteome Profiling of Small Extracellular Vesicles Isolated from Cancer Cell Lines and Patient Serum
Journal of Proteome Research · 2023 · 10.1021/acs.jproteome.3c00614
Signatures of Cysteine Oxidation on Muscle Structural and Contractile Proteins Are Associated with Physical Performance and Muscle Function in Older Adults: Study of Muscle, Mobility and Aging (SOMMA)
medRxiv · 2023 · 10.1101/2023.11.07.23298224
Mass spectrometry-based direct detection of multiple types of protein thiol modifications in pancreatic beta cells under endoplasmic reticulum stress
Redox Biology · 2021 · 10.1016/j.redox.2021.102111
Enhancement of polyhydroxyalkanoate production by co-feeding lignin derivatives with glycerol in Pseudomonas putida KT2440
Biotechnology for Biofuels · 2021 · 10.1186/s13068-020-01861-2
Stoichiometric Thiol Redox Proteomics for Quantifying Cellular Responses to Perturbations
Antioxidants · 2021 · 10.3390/antiox10030499
Elamipretide (SS-31) treatment attenuates age-associated post-translational modifications of heart proteins
GeroScience · 2021 · 10.1007/s11357-021-00447-6
Accurate Identification of Deamidation and Citrullination from Global Shotgun Proteomics Data Using a Dual-Search Delta Score Strategy
Journal of Proteome Research · 2020 · 10.1021/acs.jproteome.9b00766
Late-life restoration of mitochondrial function reverses cardiac dysfunction in old mice
eLife · 2020 · 10.7554/elife.55513
Automated Coupling of Nanodroplet Sample Preparation with Liquid Chromatography–Mass Spectrometry for High-Throughput Single-Cell Proteomics
Analytical Chemistry · 2020 · 10.1021/acs.analchem.0c01551
Stochiometric quantification of the thiol redox proteome of macrophages reveals subcellular compartmentalization and susceptibility to oxidative perturbations
Redox Biology · 2020 · 10.1016/j.redox.2020.101649
Characterization of cellular oxidative stress response by stoichiometric redox proteomics
American Journal of Physiology-Cell Physiology · 2020 · 10.1152/ajpcell.00040.2020
Protein thiol oxidation in the rat lung following e-cigarette exposure
Redox Biology · 2020 · 10.1016/j.redox.2020.101758
Discovery of potential pathways for biological conversion of poplar wood into lipids by co-fermentation of Rhodococci strains
Biotechnology for Biofuels · 2019 · 10.1186/s13068-019-1395-x
Evaluation of the cytotoxic and cellular proteome impacts of food-grade TiO2 (E171) using simulated gastrointestinal digestions and a tri-culture small intestinal epithelial model
NanoImpact · 2019 · 10.1016/j.impact.2019.100202
A proteome-wide assessment of the oxidative stress paradigm for metal and metal-oxide nanomaterials in human macrophages
NanoImpact · 2019 · 10.1016/j.impact.2019.100194
Improving mitochondrial function with SS-31 reverses age-related redox stress and improves exercise tolerance in aged mice
Free Radical Biology and Medicine · 2018 · 10.1016/j.freeradbiomed.2018.12.031
All that is silver is not toxic: silver ion and particle kinetics reveals the role of silver ion aging and dosimetry on the toxicity of silver nanoparticles
Particle and Fibre Toxicology · 2018 · 10.1186/s12989-018-0283-z
Fatiguing contractions increase protein S-glutathionylation occupancy in mouse skeletal muscle
Redox Biology · 2018 · 10.1016/j.redox.2018.05.011
Quantitative proteomic characterization of redox-dependent post-translational modifications on protein cysteines
Molecular BioSystems · 2017 · 10.1039/c6mb00861e
Fluctuation localization imaging-based fluorescence in situ hybridization (fliFISH) for accurate detection and counting of RNA copies in single cells
Nucleic Acids Research · 2017 · 10.1093/nar/gkx874
Quantitative Profiling of Protein S-Glutathionylation Reveals Redox-Dependent Regulation of Macrophage Function during Nanoparticle-Induced Oxidative Stress
ACS Nano · 2015 · 10.1021/acsnano.5b05524
Sensitive Targeted Quantification of ERK Phosphorylation Dynamics and Stoichiometry in Human Cells without Affinity Enrichment
Analytical Chemistry · 2014 · 10.1021/ac503797x
Proteome-wide Light/Dark Modulation of Thiol Oxidation in Cyanobacteria Revealed by Quantitative Site-specific Redox Proteomics
Molecular & Cellular Proteomics · 2014 · 10.1074/mcp.m114.041160
Proteomic identification and quantification of S-glutathionylation in mouse macrophages using resin-assisted enrichment and isobaric labeling
Free Radical Biology and Medicine · 2013 · 10.1016/j.freeradbiomed.2013.12.004
Iron oxide nanoparticle agglomeration influences dose rates and modulates oxidative stress-mediated dose–response profiles in vitro
Nanotoxicology · 2013 · 10.3109/17435390.2013.822115
Resin-assisted enrichment of thiols as a general strategy for proteomic profiling of cysteine-based reversible modifications
Nature Protocols · 2013 · 10.1038/nprot.2013.161
Current projects
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