Yuliya Farris

Research interests

Publications

• Environmental matrix and moisture influence soil microbial phenotypes in a simplified porous media incubation

  mSystems · 2025 · 10.1128/msystems.01616-24

• Supplementary material to "Water Column Respiration in the Yakima River Basin is Explained by Temperature, Nutrients and Suspended Solids"

  Journal · 2025 · 10.5194/egusphere-2025-1109-supplement

• Multi-omics of a model bacterial consortium deciphers details of chitin decomposition in soil

  mBio · 2025 · 10.1128/mbio.00404-25

• Supplementary material to "Water Column Respiration in the Yakima River Basin is Explained by Temperature, Nutrients and Suspended Solids"

  Journal · 2025 · 10.5194/egusphere-2025-1109-supplement

• Water Column Respiration in the Yakima River Basin is Explained by Temperature, Nutrients and Suspended Solids

  Journal · 2025 · 10.5194/egusphere-2025-1109

• Water column respiration in the Yakima River basin is explained by temperature, nutrients, and suspended solids

  Biogeosciences · 2025 · 10.5194/bg-22-6137-2025

• Gut microbiome changes with micronutrient supplementation in children with attention–deficit/hyperactivity disorder: the MADDY study

  Gut Microbes · 2025 · 10.1080/19490976.2025.2463570

• Yakima River Basin Water Column Respiration is a Minor Component of River Ecosystem Respiration

  Journal · 2024 · 10.5194/egusphere-2023-3038

• Yakima River Basin Water Column Respiration is a Minor Component of River Ecosystem Respiration

  Journal · 2024 · 10.5194/egusphere-2023-3038

• Supplementary material to "Yakima River Basin Water Column Respiration is a Minor Component of River Ecosystem Respiration"

  Journal · 2024 · 10.5194/egusphere-2023-3038-supplement

• Relationships between Habitual Polyphenol Consumption and Gut Microbiota in the INCLD Health Cohort

  Nutrients · 2024 · 10.3390/nu16060773

• Regulation of bacterial stringent response by an evolutionarily conserved ribosomal protein L11 methylation

  mBio · 2024 · 10.1128/mbio.01773-24

• Rapid remodeling of the soil lipidome in response to a drying-rewetting event

  Microbiome · 2023 · 10.1186/s40168-022-01427-4

• Removal of primary nutrient degraders reduces growth of soil microbial communities with genomic redundancy

  Frontiers in Microbiology · 2023 · 10.3389/fmicb.2022.1046661

• Sorgoleone degradation by sorghum-associated bacteria; an opportunity for enforcing plant growth promotion

  bioRxiv (Cold Spring Harbor Laboratory) · 2023 · 10.1101/2023.05.26.542311

• Interaction Networks Are Driven by Community-Responsive Phenotypes in a Chitin-Degrading Consortium of Soil Microbes

  mSystems · 2022 · 10.1128/msystems.00372-22

• Spatial Study 2021: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)

  OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) · 2022 · 10.15485/1898914

• Spatial Study 2021: Sensor-Based Time Series of Surface Water Temperature, Specific Conductance, Total Dissolved Solids, pH, and Dissolved Oxygen from across Multiple Watersheds in the Yakima River Basin, Washington, USA (v3)

  OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) · 2022 · 10.15485/1892052

• Associations between Frequency of Culinary Herb Use and Gut Microbiota

  Nutrients · 2022 · 10.3390/nu14091981

• Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)

  OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) · 2022 · 10.15485/1898912

• Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)

  OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) · 2022 · 10.15485/1898912

• Terabase Metagenome Sequencing of Grassland Soil Microbiomes

  Microbiology Resource Announcements · 2020 · 10.1128/mra.00718-20

• Soil microbial EPS resiliency is influenced by carbon source accessibility

  Soil Biology and Biochemistry · 2020 · 10.1016/j.soilbio.2020.108037

• Development and Analysis of a Stable, Reduced Complexity Model Soil Microbiome

  Frontiers in Microbiology · 2020 · 10.3389/fmicb.2020.01987

• Dynamics of Global Gene Expression and Regulatory Elements in Growing Brachypodium Root System

  Scientific Reports · 2020 · 10.1038/s41598-020-63224-z

• A broad-host-range event detector: expanding and quantifying performance between Escherichia coli and Pseudomonas species

  Synthetic Biology · 2020 · 10.1093/synbio/ysaa002

• Selection, Succession, and Stabilization of Soil Microbial Consortia

  mSystems · 2019 · 10.1128/msystems.00055-19

• Selection, succession and stabilization of soil microbial consortia

  bioRxiv (Cold Spring Harbor Laboratory) · 2019 · 10.1101/533604

• Siderophore profiling of co-habitating soil bacteria by ultra-high resolution mass spectrometry

  Metallomics · 2018 · 10.1039/c8mt00252e

Current projects

No projects listed.