Hyun‐Seob Song

Research interests

Publications

• Potential bioavailability of representative pyrogenic organic matter compounds in comparison to natural dissolved organic matter pools

  Biogeosciences · 2023 · 10.5194/bg-20-3449-2023

• Potential bioavailability of pyrogenic organic matter resembles natural dissolved organic matter pools

  Journal · 2022 · 10.5194/egusphere-2022-194

• Interaction Networks Are Driven by Community-Responsive Phenotypes in a Chitin-Degrading Consortium of Soil Microbes

  mSystems · 2022 · 10.1128/msystems.00372-22

• Disturbance triggers non-linear microbe–environment feedbacks

  Biogeosciences · 2021 · 10.5194/bg-18-4773-2021

• Disturbance Triggers Non-Linear Microbe-Environment Feedbacks

  bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 10.1101/2020.09.30.314328

• Representing Organic Matter Thermodynamics in Biogeochemical Reactions via Substrate-Explicit Modeling

  Frontiers in Microbiology · 2020 · 10.3389/fmicb.2020.531756

• Deep learning predicts microbial interactions from self-organized spatiotemporal patterns

  Computational and Structural Biotechnology Journal · 2020 · 10.1016/j.csbj.2020.05.023

• Carbon Limitation Leads to Thermodynamic Regulation of Aerobic Metabolism

  Environmental Science & Technology Letters · 2020 · 10.1021/acs.estlett.0c00258

• Carbon limitation leads to thermodynamic regulation of aerobic metabolism

  bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 10.1101/2020.01.15.905331

• Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations

  mSystems · 2019 · 10.1128/msystems.00061-19

• Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture

  Scientific Reports · 2018 · 10.1038/s41598-017-18630-1

• Drought Conditions Maximize the Impact of High‐Frequency Flow Variations on Thermal Regimes and Biogeochemical Function in the Hyporheic Zone

  Water Resources Research · 2018 · 10.1029/2018wr022586

• Regulation-Structured Dynamic Metabolic Model Provides a Potential Mechanism for Delayed Enzyme Response in Denitrification Process

  Frontiers in Microbiology · 2017 · 10.3389/fmicb.2017.01866

• Microbial Community Metabolic Modeling: A Community Data‐Driven Network Reconstruction

  Journal of Cellular Physiology · 2016 · 10.1002/jcp.25428

• Dynamic Metabolic Modeling of Denitrifying Bacterial Growth: The Cybernetic Approach

  Industrial & Engineering Chemistry Research · 2015 · 10.1021/acs.iecr.5b01615

• Prediction of Metabolic Flux Distribution from Gene Expression Data Based on the Flux Minimization Principle

  PLoS ONE · 2014 · 10.1371/journal.pone.0112524

• Mathematical Modeling of Microbial Community Dynamics: A Methodological Review

  Processes · 2014 · 10.3390/pr2040711

• Modeling metabolic systems: the need for dynamics

  Current Opinion in Chemical Engineering · 2013 · 10.1016/j.coche.2013.08.004

• Dynamic models of metabolism: Review of the cybernetic approach

  AIChE Journal · 2012 · 10.1002/aic.13734

• Exacting predictions by cybernetic model confirmed experimentally: Steady state multiplicity in the chemostat

  Biotechnology Progress · 2012 · 10.1002/btpr.1583

• Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth

  Metabolic Engineering · 2012 · 10.1016/j.ymben.2012.08.004

• Prediction of dynamic behavior of mutant strains from limited wild-type data

  Metabolic Engineering · 2012 · 10.1016/j.ymben.2012.02.003

• Experimental and theoretical analysis of poly(β-hydroxybutyrate) formation and consumption in Ralstonia eutropha

  Biochemical Engineering Journal · 2011 · 10.1016/j.bej.2011.03.006

• Prediction of metabolic function from limited data: Lumped hybrid cybernetic modeling (L‐HCM)

  Biotechnology and Bioengineering · 2010 · 10.1002/bit.22692

• Cybernetic models based on lumped elementary modes accurately predict strain‐specific metabolic function

  Biotechnology and Bioengineering · 2010 · 10.1002/bit.22922

• Systematic development of hybrid cybernetic models: Application to recombinant yeast co‐consuming glucose and xylose

  Biotechnology and Bioengineering · 2009 · 10.1002/bit.22332

• Reduction of a set of elementary modes using yield analysis

  Biotechnology and Bioengineering · 2008 · 10.1002/bit.22062

• A general correlation for pressure drop in a Kenics static mixer

  Chemical Engineering Science · 2005 · 10.1016/j.ces.2005.04.084

• Operating strategies for Fischer-Tropsch reactors: A model-directed study

  Korean Journal of Chemical Engineering · 2004 · 10.1007/bf02705414

• Transient solutions of the dynamics in film blowing processes

  Journal of Non-Newtonian Fluid Mechanics · 2004 · 10.1016/j.jnnfm.2004.06.004

Current projects

No projects listed.