Martien A. M. Groenen

Research interests

Publications

• A compendium of genetic regulatory effects across pig tissues

  Nature Genetics · 2024 · https://doi.org/10.1038/s41588-023-01585-7

• Recent natural selection causes adaptive evolution of an avian polygenic trait

  Science · 2017 · 10.1126/science.aal3298

• Evolutionary signals of selection on cognition from the great tit genome and methylome

  Nature Communications · 2016 · 10.1038/ncomms10474

• Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

  Genome biology · 2015 · https://doi.org/10.1186/s13059-015-0622-4

• Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes

  Nature Genetics · 2015 · 10.1038/ng.3394

• Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression

  Nature Communications · 2014 · 10.1038/ncomms5392

• Signatures of Diversifying Selection in European Pig Breeds

  PLoS Genetics · 2013 · 10.1371/journal.pgen.1003453

• The duck genome and transcriptome provide insight into an avian influenza virus reservoir species

  Nature Genetics · 2013 · 10.1038/ng.2657

• Strong signatures of selection in the domestic pig genome

  Proceedings of the National Academy of Sciences · 2012 · 10.1073/pnas.1217149109

• Pig Domestication and Human-Mediated Dispersal in Western Eurasia Revealed through Ancient DNA and Geometric Morphometrics

  Molecular Biology and Evolution · 2012 · 10.1093/molbev/mss261

• Analyses of pig genomes provide insight into porcine demography and evolution

  Nature · 2012 · 10.1038/nature11622

• Regions of Homozygosity in the Porcine Genome: Consequence of Demography and the Recombination Landscape

  PLoS Genetics · 2012 · 10.1371/journal.pgen.1003100

• The development and characterization of a 60K SNP chip for chicken

  BMC Genomics · 2011 · 10.1186/1471-2164-12-274

• Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis

  PLoS Biology · 2010 · https://doi.org/10.1371/journal.pbio.1000475

• Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology

  PLoS ONE · 2009 · 10.1371/journal.pone.0006524

• Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds

  Proceedings of the National Academy of Sciences · 2008 · 10.1073/pnas.0806569105

• A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate

  Genome Research · 2008 · 10.1101/gr.086538.108

• A physical map of the chicken genome

  Nature · 2004 · 10.1038/nature03030

• Biodiversity of 52 chicken populations assessed by microsatellite typing of DNA pools

  Genetics Selection Evolution · 2003 · 10.1186/1297-9686-35-6-533

• Empirical Evaluation of Genetic Clustering Methods Using Multilocus Genotypes From 20 Chicken Breeds

  Genetics · 2001 · 10.1093/genetics/159.2.699

• Genetic diversity of eleven European pig breeds

  Genetics Selection Evolution · 2000 · 10.1051/gse:2000113

• A consensus linkage map of the chicken genome.

  PubMed · 2000 · 10.1101/gr.10.1.137

• Genome-wide scan for body composition in pigs reveals important role of imprinting

  Proceedings of the National Academy of Sciences · 2000 · https://doi.org/10.1073/pnas.140216397

• Detection of Quantitative Trait Loci for Backfat Thickness and Intramuscular Fat Content in Pigs (Sus scrofa)

  Genetics · 1999 · https://doi.org/10.1093/genetics/152.4.1679

• The PiGMaP consortium linkage map of the pig (Sus scrofa)

  Mammalian Genome · 1995 · 10.1007/bf00293008

Current projects

No projects listed.