Xin Liu

Research interests

Publications

• Single-cell spatial transcriptome reveals cell-type organization in the macaque cortex

  Cell · 2023 · https://doi.org/10.1016/j.cell.2023.06.009

• Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars

  Nature Genetics · 2022 · https://doi.org/10.1038/s41588-021-00971-3

• The Earth BioGenome Project 2020: Starting the clock

  Proceedings of the National Academy of Sciences · 2022 · https://doi.org/10.1073/pnas.2115635118

• Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning

  Nature Communications · 2021 · https://doi.org/10.1038/s41467-021-23576-0

• A chickpea genetic variation map based on the sequencing of 3,366 genomes

  Nature · 2021 · https://doi.org/10.1038/s41586-021-04066-1

• An atlas of the protein-coding genes in the human, pig, and mouse brain

  Science · 2020 · https://doi.org/10.1126/science.aay5947

• Nitrogen Vacancies on 2D Layered W 2 N 3 : A Stable and Efficient Active Site for Nitrogen Reduction Reaction

  Advanced Materials · 2019 · https://doi.org/10.1002/adma.201902709

• Building Up a Picture of the Electrocatalytic Nitrogen Reduction Activity of Transition Metal Single-Atom Catalysts

  Journal of the American Chemical Society · 2019 · https://doi.org/10.1021/jacs.9b03811

• 1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses

  Nature Biotechnology · 2019 · 10.1038/s41587-018-0008-8

• Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits

  Nature Genetics · 2019 · https://doi.org/10.1038/s41588-019-0401-3

• Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

  Nature Communications · 2019 · https://doi.org/10.1038/s41467-018-08205-7

• Emerging Two-Dimensional Nanomaterials for Electrocatalysis

  Chemical Reviews · 2018 · https://doi.org/10.1021/acs.chemrev.7b00689

• Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments

  Nature Biotechnology · 2017 · https://doi.org/10.1038/nbt.3943

• The gut microbiome in atherosclerotic cardiovascular disease

  Nature Communications · 2017 · https://doi.org/10.1038/s41467-017-00900-1

• A reference gene catalogue of the pig gut microbiome

  Nature Microbiology · 2016 · 10.1038/nmicrobiol.2016.161

• The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut

  Nature Genetics · 2016 · 10.1038/ng.3517

• The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing

  eLife · 2016 · https://doi.org/10.7554/elife.12081

• Genome-wide association study identifies peanut allergy-specific loci and evidence of epigenetic mediation in US children

  Nature Communications · 2015 · https://doi.org/10.1038/ncomms7304

• Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

  Nature Biotechnology · 2015 · https://doi.org/10.1038/nbt.3208

• Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential

  Nature Biotechnology · 2012 · 10.1038/nbt.2195

• Single-Cell Exome Sequencing and Monoclonal Evolution of a JAK2-Negative Myeloproliferative Neoplasm

  Cell · 2012 · 10.1016/j.cell.2012.02.028

• Maize HapMap2 identifies extant variation from a genome in flux

  Nature Genetics · 2012 · https://doi.org/10.1038/ng.2313

• The tomato genome sequence provides insights into fleshy fruit evolution

  Nature · 2012 · https://doi.org/10.1038/nature11119

• Purification, physicochemical characterisation and anticancer activity of a polysaccharide from Cyclocarya paliurus leaves

  Food Chemistry · 2012 · https://doi.org/10.1016/j.foodchem.2012.09.078

• Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

  Nature Biotechnology · 2011 · 10.1038/nbt.2050

• Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

  Nature Genetics · 2010 · https://doi.org/10.1038/ng.715

Current projects

No projects listed.