Mikko Karttunen

Research interests

Publications

• AlphaFold2: A Role for Disordered Protein/Region Prediction?

  International Journal of Molecular Sciences · 2022 · 10.3390/ijms23094591

• Porphyrin–phospholipid liposomes permeabilized by near-infrared light

  Nature Communications · 2014 · https://doi.org/10.1038/ncomms4546

• Classical Electrostatics for Biomolecular Simulations

  Chemical Reviews · 2013 · 10.1021/cr300461d

• Comparison of Secondary Structure Formation Using 10 Different Force Fields in Microsecond Molecular Dynamics Simulations

  Journal of Chemical Theory and Computation · 2012 · 10.1021/ct300323g

• Multiscale modeling of emergent materials: biological and soft matter

  Physical Chemistry Chemical Physics · 2009 · 10.1039/b818051b

• Ionic Surfactant Aggregates in Saline Solutions: Sodium Dodecyl Sulfate (SDS) in the Presence of Excess Sodium Chloride (NaCl) or Calcium Chloride (CaCl2)

  The Journal of Physical Chemistry B · 2009 · 10.1021/jp901228v

• The hydrophobic effect and its role in cold denaturation

  Cryobiology · 2009 · 10.1016/j.cryobiol.2009.07.005

• Ordering effects of cholesterol and its analogues

  Biochimica et Biophysica Acta (BBA) - Biomembranes · 2008 · https://doi.org/10.1016/j.bbamem.2008.08.022

• Assessing the Nature of Lipid Raft Membranes

  PLoS Computational Biology · 2007 · https://doi.org/10.1371/journal.pcbi.0030034

• Structural Properties of Ionic Detergent Aggregates: A Large-Scale Molecular Dynamics Study of Sodium Dodecyl Sulfate

  The Journal of Physical Chemistry B · 2007 · 10.1021/jp072587a

• Atomic-Scale Structure and Electrostatics of Anionic Palmitoyloleoylphosphatidylglycerol Lipid Bilayers with Na+ Counterions

  Biophysical Journal · 2006 · 10.1529/biophysj.106.086272

• Under the Influence of Alcohol: The Effect of Ethanol and Methanol on Lipid Bilayers

  Biophysical Journal · 2005 · https://doi.org/10.1529/biophysj.105.062364

• Lipid Bilayers Driven to a Wrong Lane in Molecular Dynamics Simulations by Subtle Changes in Long-Range Electrostatic Interactions

  The Journal of Physical Chemistry B · 2004 · 10.1021/jp031281a

• Lessons of Slicing Membranes: Interplay of Packing, Free Area, and Lateral Diffusion in Phospholipid/Cholesterol Bilayers

  Biophysical Journal · 2004 · https://doi.org/10.1529/biophysj.104.041368

• How would you integrate the equations of motion in dissipative particle dynamics simulations?

  TU/e Research Portal · 2003

• Molecular dynamics simulations of lipid bilayers : major artifacts due to truncating electrostatic interactions

  TU/e Research Portal · 2003

• Integration schemes for dissipative particle dynamics simulations: From softly interacting systems towards hybrid models

  The Journal of Chemical Physics · 2002 · 10.1063/1.1450554

Current projects

No projects listed.