Janusz M. Bujnicki

Research interests

Publications

• MODOMICS: a database of RNA modifications and related information. 2023 update

  Nucleic Acids Research · 2023 · 10.1093/nar/gkad1083

• MODOMICS: a database of RNA modification pathways. 2021 update

  Nucleic Acids Research · 2021 · https://doi.org/10.1093/nar/gkab1083

• Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements

  Nucleic Acids Research · 2020 · 10.1093/nar/gkaa1053

• Matching tRNA modifications in humans to their known and predicted enzymes

  Nucleic Acids Research · 2019 · 10.1093/nar/gkz011

• Matching tRNA modifications in humans to their known and predicted enzymes

  Nucleic Acids Research · 2019 · 10.1093/nar/gkz011

• Matching tRNA modifications in humans to their known and predicted enzymes

  Nucleic Acids Research · 2019 · 10.1093/nar/gkz011

• RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme

  RNA · 2017 · 10.1261/rna.060368.116

• MODOMICS: a database of RNA modification pathways. 2017 update

  Nucleic Acids Research · 2017 · https://doi.org/10.1093/nar/gkx1030

• RNAcentral: a comprehensive database of non-coding RNA sequences

  Nucleic Acids Research · 2016 · 10.1093/nar/gkw1008

• SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction

  Nucleic Acids Research · 2015 · https://doi.org/10.1093/nar/gkv1479

• RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures

  RNA · 2015 · 10.1261/rna.049502.114

• NPDock: a web server for protein–nucleic acid docking

  Nucleic Acids Research · 2015 · 10.1093/nar/gkv493

• The RNase H-like superfamily: new members, comparative structural analysis and evolutionary classification

  Nucleic Acids Research · 2014 · 10.1093/nar/gkt1414

• Distribution and frequencies of post-transcriptional modifications in tRNAs

  RNA Biology · 2014 · 10.4161/15476286.2014.992273

• The RNase H-like superfamily: new members, comparative structural analysis and evolutionary classification

  Nucleic Acids Research · 2014 · 10.1093/nar/gkt1414

• The RNase H-like superfamily: new members, comparative structural analysis and evolutionary classification

  Nucleic Acids Research · 2014 · 10.1093/nar/gkt1414

• MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins

  BMC Bioinformatics · 2012 · 10.1186/1471-2105-13-111

• MODOMICS: a database of RNA modification pathways—2013 update

  Nucleic Acids Research · 2012 · https://doi.org/10.1093/nar/gks1007

• RNA-Puzzles : A CASP-like evaluation of RNA three-dimensional structure prediction

  RNA · 2012 · 10.1261/rna.031054.111

• ModeRNA: a tool for comparative modeling of RNA 3D structure

  Nucleic Acids Research · 2011 · 10.1093/nar/gkq1320

• The YTH Domain Is a Novel RNA Binding Domain

  Journal of Biological Chemistry · 2010 · 10.1074/jbc.m110.104711

• MODOMICS: a database of RNA modification pathways. 2008 update

  Nucleic Acids Research · 2008 · 10.1093/nar/gkn710

• MODOMICS: a database of RNA modification pathways. 2008 update

  Nucleic Acids Research · 2008 · 10.1093/nar/gkn710

• MODOMICS: a database of RNA modification pathways. 2008 update

  Nucleic Acids Research · 2008 · 10.1093/nar/gkn710

• IAPs contain an evolutionarily conserved ubiquitin-binding domain that regulates NF-κB as well as cell survival and oncogenesis

  Nature Cell Biology · 2008 · 10.1038/ncb1789

• Transcriptome Profile of Human Colorectal Adenomas

  Molecular Cancer Research · 2007 · https://doi.org/10.1158/1541-7786.mcr-07-0267

• Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB

  BMC Genomics · 2003 · 10.1186/1471-2164-4-48

• Streptococcal Scl1 and Scl2 Proteins Form Collagen-like Triple Helices

  Journal of Biological Chemistry · 2002 · 10.1074/jbc.m201163200

• Structure Prediction and Phylogenetic Analysis of a Functionally Diverse Family of Proteins Homologous to the MT-A70 Subunit of the Human mRNA:m6A Methyltransferase

  Journal of Molecular Evolution · 2002 · 10.1007/s00239-002-2339-8

• Structure prediction meta server

  Bioinformatics · 2001 · 10.1093/bioinformatics/17.8.750

• Pcons: A neural‐network–based consensus predictor that improves fold recognition

  Protein Science · 2001 · 10.1110/ps.08501

Current projects

No projects listed.